Insertion junction: CLIP2.018732_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018732
Chromosome:chromosome 6
Location:2371255
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268200 TGD1 Lipid transfer machine permease; (1 of 1) PTHR30188//PTHR30188:SF2 - ABC TRANSPORTER PERMEASE PROTEIN-RELATED // PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCGCATGCACACGTTCTTGCAGAAATCGTCGCTGTCAATGGTGCTTC
Internal bar code:GATTCATGTAGGCCTGGCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:414
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTATGTGGGTGTGTGG
Suggested primer 2:TCAACCCACATCCCTGATGC