Insertion junction: CLIP2.018737_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018737
Chromosome:chromosome 17
Location:2820024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718400 (1 of 1) IPR001810//IPR011050 - F-box domain // Pectin lyase fold/virulence factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAACCACCCAACGCCGCCCCAAACGCTACCTCCGCCCCCTGCTATAC
Internal bar code:AAGGCTAAAAAGATTAACTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1529
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTGGGCTCTCCTTTTGC
Suggested primer 2:GGTTTGAGTTTCACACCGGC