Insertion junction: CLIP2.018739_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018739
Chromosome:chromosome 12
Location:2026326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510550 (1 of 2) PTHR12197//PTHR12197:SF145 - SET AND MYND DOMAIN CONTAINING // SET DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCGTGAGCACGCGGGCCCGTGCATGCATGACGGCGCCCGGGGGACCC
Internal bar code:TCTGGGACATTGTTTTACTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1910
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGCTTCATGCACGTACC
Suggested primer 2:CGTTACCACAGCGAAGAGGT