Insertion junction: CLIP2.018746_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018746
Chromosome:chromosome 1
Location:509453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003050 SEC8 (1 of 1) PTHR14146:SF0 - EXOCYST COMPLEX COMPONENT 4; Component of the Exocyst Complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCGCGGTGCTTGCCGCCGCCAGTCTGCACTTCCCCTCCTTGCCAGTC
Internal bar code:TGGCACGTTCTAGGTAAAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:145
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTTTGTACTCAGCGACT
Suggested primer 2:CCTACCGAATACCGAGCGTC