Insertion junction: CLIP2.018748_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018748
Chromosome:chromosome 3
Location:4340617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00065772

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCGGGGGTGGTTTCGACCTGGTTTCGACCTGGTTTCGACCCGAAGCT
Internal bar code:AGAGCTGGGCTTGGTGGCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2498
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCACAGCTCTATCTCCAG
Suggested primer 2:TTCATGGGTGAGGGGAATGC