Insertion junction: CLIP2.018758_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018758
Chromosome:chromosome 16
Location:7067118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674852 HAP2,GCS1 (1 of 1) PF10699 - Male gamete fusion factor (HAP2-GCS1); Generative cell specific-1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCGCGGCAGGCAGGTGCAAAGCAAGATTGAGAATCAGATATGGGAGA
Internal bar code:ATGAATACGGCGATGCTCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2264
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTCCATGTTTGTGCTGC
Suggested primer 2:TTGTGTATCCGCAGCACAGT