Insertion junction: CLIP2.018760_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018760
Chromosome:chromosome 10
Location:724744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422450 GGT1,PGSIP6 (1 of 1) PTHR11183//PTHR11183:SF39 - GLYCOGENIN // PROTEIN GYG-1, ISOFORM A; Plant glycogenin-like starch initiation protein 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGAAAGGATAGGAGAGAAGGAGTCGGGATGAATGGGGCGGGAGGAGA
Internal bar code:GTCAGGACTTTCTTGCCCGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2437
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTTTGTGGGGCCATAGT
Suggested primer 2:CGGGCACTTGAAGATGGAGT