Insertion junction: CLIP2.018781_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018781
Chromosome:chromosome 5
Location:892690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246400 (1 of 1) 2.3.1.5 - Arylamine N-acetyltransferase / Arylamine acetylase CDS
Cre05.g246552 (1 of 2) PTHR10566//PTHR10566:SF86 - CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED // ABC1 PROTEIN KINASE 6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCGCCTTCCTCGAGGTGCTCGGCGTCGACGCAGCCACAGTCGACCCG
Internal bar code:GTCACTTCGACGTGTCCCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:468
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGTCTGGATGCTGCACA
Suggested primer 2:GTGACCGGTGAGCTATCGAG