Insertion junction: CLIP2.018789_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018789
Chromosome:chromosome 9
Location:3556656
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396624 (1 of 1) IPR000104//IPR001841//IPR002110//IPR016024//IPR020683 - Antifreeze protein, type I // Zinc finger, RING-type // Ankyrin repeat // Armadillo-type fold // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGGGGACCACCTGGCGGCAGAAGGGGCACGCCAGCGGCCGCACACGG
Internal bar code:TTAGTTTTTTGTCCCGGCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2757
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCATCCTTGGATCTAGC
Suggested primer 2:GAGGAACACAAGCCCTCTCC