Insertion junction: CLIP2.018794_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018794
Chromosome:chromosome 17
Location:3709367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726000 PAP3 Class-II RNA nucleotidyl transferase 3, mitochondrial; (1 of 2) 2.7.7.72 - CCA tRNA nucleotidyltransferase / tRNA-nucleotidyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTCCGAGGCTGGGGCAGGGGCATGCCGTGAAGTGTGAACACACGACT
Internal bar code:ATGTTCGGCACGTACCCATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3198
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:AACATGCTATCTACCGGCCG
Suggested primer 2:AAGCATTACAGACGGTGGGG