Insertion junction: CLIP2.018796_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018796
Chromosome:chromosome 13
Location:1358601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571560 (1 of 1) PF09737 - De-etiolated protein 1 Det1 (Det1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCACCTCCGGGATATCTAGTTGCTGGGCCTACGAGGGCGGTCAACAT
Internal bar code:CAAATGGCGGCACTGTTTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:747
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCAACCAAAAGCCCGTC
Suggested primer 2:GCAAAGAGGTGGTCGGGTAA