Insertion junction: CLIP2.018799_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018799
Chromosome:chromosome 7
Location:5271263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349540 (1 of 1) PF07714//PF13857 - Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (many copies) (Ank_5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGCGCTGCGGCAGTAGCAGCTGGGGCGGGCCAGCCGCTAAAGCATC
Internal bar code:TTGCAAATGGACCCCGTAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2054
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCTCTCCCATGCACTTG
Suggested primer 2:ATTGAAAGTGAGGCCGTCGT