Insertion junction: CLIP2.018799_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018799
Chromosome:chromosome 7
Location:5271629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349540 (1 of 1) PF07714//PF13857 - Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (many copies) (Ank_5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCATCAACTTCATCGCGCAGCAGCAGGAGTTGCAAGCGCTGGCGCGG
Internal bar code:TTGCAAATGGACCCCGTAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3354
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGAAAGTGAGGCCGTCGT
Suggested primer 2:TCAGCTCTCCCATGCACTTG