Insertion junction: CLIP2.018802_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018802
Chromosome:chromosome 3
Location:5149204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800343 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTGGCCGAAATCCCAAAAATGTCTTCGTCTGTTTGCCGAAAGACCCCC
Internal bar code:TTATACCTAACTAACGACATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1865
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTATTACCAAGCAGGCGC
Suggested primer 2:CATGCAAACAACTCACCGCA