Insertion junction: CLIP2.018807_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018807
Chromosome:chromosome 4
Location:3564092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228400 WRK1 (1 of 1) PF03106 - WRKY DNA -binding domain (WRKY); WRKY family transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATAGTCAATGGCTGGGTCGCGTCGACCACAGGGACCAGCTCCCTTAC
Internal bar code:GTGCAGACATGGTCGACGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3837
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGTGTAGCGCCTGATAG
Suggested primer 2:TCCCCCTGTCCCGACATAAT