Insertion junction: CLIP2.018812_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018812
Chromosome:chromosome 14
Location:3587209
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801659 intron
lncRNA_TCONS_00105207 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTCTGACGCAGAAAGCTATCCGACGGAGGCCGACTCGCTGATTTGAG
Internal bar code:AGTCAGCTGTGGCTTAGAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTCTCATTCTTGGGCCT
Suggested primer 2:AGCCCGGAGACTGAAATTGG