Insertion junction: CLIP2.018821_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018821
Chromosome:chromosome 2
Location:6683824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387171 RHM1,DIV109,EZY22 nucleotide-rhamnose synthase/epimerase-reductase, dTDP-4-dehydrorhamnose reductase / dTDP-6-deoxy-L-mannose dehydrogenase; (1 of 1) 1.1.1.133 - dTDP-4-dehydrorhamnose reductase / dTDP-6-deoxy-L-mannose dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGGCAAAGCCGACACCCGAACCCAAGCGCAGTGGGTGCACTCACACG
Internal bar code:CCCGGACGCAATCAATACGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3089
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCTCCTTCAACCAAGCC
Suggested primer 2:CCGGGAAGTCATCGTCGTAG