Insertion junction: CLIP2.018824_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018824
Chromosome:chromosome 12
Location:5266187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527918 (1 of 239) IPR016024 - Armadillo-type fold 5'UTR
Cre12.g801429 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTGCCAACTTTAGCCGCCAAACGCCTGTATACACGGTGCACATCGTT
Internal bar code:AGATACACTATTTTCTGGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:429
LEAP-Seq percent confirming:5.07246
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:131
LEAP-Seq n unique pos:138

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGTATTTGCCGCTGGTA
Suggested primer 2:ACGACGTACACCAGCATTGT