Insertion junction: CLIP2.018828_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018828
Chromosome:chromosome 3
Location:7987512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201950 (1 of 1) IPR003882//IPR008752//IPR024079 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin // Metallopeptidase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACCAAGCCCCAAGCCGCCCAGCCCGACCCCAAGTCCCAAGCCGCCCA
Internal bar code:TCGGTTTGGTATGAGATCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3032
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCATACTGGCACTTGG
Suggested primer 2:CGTCCTCGGCCTTACATCTC