Insertion junction: CLIP2.018862_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018862
Chromosome:chromosome 10
Location:1762907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430501 (1 of 1) PTHR22904//PTHR22904:SF331 - TPR REPEAT CONTAINING PROTEIN // CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN CDS
Cre10.g801118 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCACGACGAGGCGCAGGCGGCGCGGGTGCGTGTGCGGGCGTGTTGTGG
Internal bar code:TGTTGGCTTTTATGTTTCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCCACCCCTACTCACCT
Suggested primer 2:CTCAACACAACCACGTGCAG