Insertion junction: CLIP2.018864_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018864
Chromosome:chromosome 13
Location:1192563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569850 AMT4,AMT1D Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGACTCTCTCAATCGTACGCAGCACATGCTTGCCCCGTGGCAACCCGG
Internal bar code:GTTGTAGATAGCGGAACGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2380
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TACGACAGCAGACGACACAC
Suggested primer 2:GACAACAGTGACCTGAGCGA