Insertion junction: CLIP2.018866_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018866
Chromosome:chromosome 16
Location:3178473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665450 RYR1,FAP48 Ryanodine-inositol 1%252C4%252C5-triphosphate receptor Ca2+ channel; (1 of 1) K04958 - inositol 1,4,5-triphosphate receptor type 1 (ITPR1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGCCGGTGTGTGCCGAGAGCGTAAGGGTTGGGCAAGGGCGCTTCTCC
Internal bar code:GGATAAGGTCATTCTAGAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1533
LEAP-Seq percent confirming:70.3704
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCGAGCAGTTGAAACA
Suggested primer 2:GGAGAAGTCCCAGAAGGTGC