Insertion junction: CLIP2.018870_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018870
Chromosome:chromosome 4
Location:1753686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g211950 ELG32 Exostosin-like glycosyltransferase 32; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCTGTGCTCCTGTAAGACCGGCTGCGTAGTGTCATGCCGCCCGTCCC
Internal bar code:CTTAGTGCACTAAAGATGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3880
LEAP-Seq percent confirming:96.3636
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CATCAAACGCAAGCACCACA
Suggested primer 2:GATGGTCCAGGAACTCCACG