Insertion junction: CLIP2.018879_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018879
Chromosome:chromosome 6
Location:5530788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286750 (1 of 2) PF15247 - Histone RNA hairpin-binding protein RNA-binding domain (SLBP_RNA_bind) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCATCGCGCGACCGAGGTGAGCTCGGCGAGCCCTGGCTGCCGAGGCT
Internal bar code:CACAGCTAGCTTTTTGAATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1707
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAATTACGGCCCAAAGCA
Suggested primer 2:GCTTGTTCCTGCATGCAACA