Insertion junction: CLIP2.018891_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018891
Chromosome:chromosome 17
Location:677276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g700500 (1 of 1) PTHR23196//PTHR23196:SF13 - PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTGTCCGAACCGCTGTCACAGCCAGCTACAAACCGTCACCTAATCCA
Internal bar code:AGCAATAGCGTTTTGTCATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1430
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGTAGTCCTCATCTCCG
Suggested primer 2:CTTTGAGCCTCTGTCCCAGG