Insertion junction: CLIP2.018893_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018893
Chromosome:chromosome 1
Location:5355371
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g037751 (1 of 20) IPR013761 - Sterile alpha motif/pointed domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCTGTATGTATCTTACAGCCTACAGGTGATTCGTGCGTGGGCCTGAC
Internal bar code:TGGATCACCCTTTCAAAAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2218
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGTGTGGATCCACTCAGC
Suggested primer 2:TCTGATGGCCACATTGCTGT