Insertion junction: CLIP2.018918_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018918
Chromosome:chromosome 16
Location:5757360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680500 EFH10 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair; EF-hand Calcium binding protein, may be centrin-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGCAGCCGTCGTCACAGGGGCTGTCGGCGTCAGGGGCAGCCGCAGGC
Internal bar code:CGAGGTACAGAGTCTAAGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1845
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCATTGACACCGCTCTTGCT
Suggested primer 2:CAAGAAGCAGGTGGGAGGAG