Insertion junction: CLIP2.018923_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018923
Chromosome:chromosome 17
Location:2628323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716600 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGTCTAAACCCCCTGTGTTGCAGTGGGGCGGCTGCTGCACCTGCCGC
Internal bar code:CTGACTGGAAGGTGCACTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2855
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACAGAGAGCCAAGTGA
Suggested primer 2:CGCATTCTCACAGATGTGCG