Insertion junction: CLIP2.018934_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018934
Chromosome:chromosome 9
Location:6059041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412700 (1 of 3) PF01541 - GIY-YIG catalytic domain (GIY-YIG) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTGGCTGTCCCAATTCCGCCGCCGCCCTCACGTCCAGAGCATCTAAT
Internal bar code:AGAGCGGTGCATCGTGAGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4023
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAGCATGATAGCGGTTG
Suggested primer 2:TGCGAAACGTCCAAAAGCAG