Insertion junction: CLIP2.018940_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018940
Chromosome:chromosome 3
Location:5309942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182700 (1 of 1) PTHR31832//PTHR31832:SF3 - FAMILY NOT NAMED // B-BOX ZINC FINGER PROTEIN 20 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCGACAACAGCAGCAAGTGATGCCGCATTCGCTGCAGCAGCAGCAGC
Internal bar code:CAACGTGACTGGATCTCCCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:765
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGTTGTTGGTGCTGTTG
Suggested primer 2:GAAGACTCCTGGACATGCCC