Insertion junction: CLIP2.018947_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018947
Chromosome:chromosome 2
Location:4896459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g109800 CPLD32,FAO3 conserved FAD dependent oxidoreductase; (1 of 1) PTHR13847//PTHR13847:SF184 - FAD NAD BINDING OXIDOREDUCTASES // FAD-DEPENDENT OXIDOREDUCTASE-LIKE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAACGCACACGCACCAACAGCTGCCACGCCGCCGCCACGCCCGCCAG
Internal bar code:GTATAGACTCGGGTCGAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1590
LEAP-Seq percent confirming:86.8421
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTAGAGGTTTGCAGCGA
Suggested primer 2:AGACCATGGCGCCATACAAA