Insertion junction: CLIP2.018952_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018952
Chromosome:chromosome 17
Location:168960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697000 (1 of 2) PTHR23155:SF401 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGTGCAGTGGGCCTTCACACTTAGCCCGCAAGGCGGCGGAGCTGGC
Internal bar code:AGACACCGTAGCTTGTGGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1144
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTAACACACATGCTGCTGCG
Suggested primer 2:CAAGCACATGCGTGTTCACA