Insertion junction: CLIP2.018958_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018958
Chromosome:chromosome 15
Location:1622331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre19.g750547 NDA2 thylakoid NADH dehydrogenase; (1 of 3) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGTATGCAACACGCACCCTCCACACAGCATACTTACCCATGTGTCAT
Internal bar code:TTGGCTCATGTACGATGGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1391
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGACGTACGGTACAGTCG
Suggested primer 2:CTCCACCCACATCATTGCCT