Insertion junction: CLIP2.018975_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018975
Chromosome:chromosome 9
Location:6064309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412750 (1 of 1) K06228 - fused (FU) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGACCCAAGGCTATTTTATGTGTCGCCTGTGAGCAGCGCTCCAGGGC
Internal bar code:GCAAGAGCCAAATATTTTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:991
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCTGACCACCGGTAGTA
Suggested primer 2:AACTGACGCCTCTGACTGTG