Insertion junction: CLIP2.018979_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018979
Chromosome:chromosome 13
Location:2051731
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576740 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCACGTCCAGGCTCGGCGGCATGCGCGGACTGTGATGTGTAGTCATCA
Internal bar code:GCCGGGTTGGTTACTCTTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCCGTGGCATTGGTGTA
Suggested primer 2:GGAAGGGTTTGCTGCTGTTG