Insertion junction: CLIP2.018982_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018982
Chromosome:chromosome 14
Location:458632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610801 CDS
lncRNA_TCONS_00189579 CDS
lncRNA_TCONS_00189580 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATAGTAGAGCACTTCAGCCAGACAAAGTCGTCGAGCCGGGACATCAT
Internal bar code:ATCGTTAAACTTCTCCTGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1469
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTACATCGTAGGACCCTG
Suggested primer 2:CTGCACCCACATGGAGATGT