Insertion junction: CLIP2.018986_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018986
Chromosome:chromosome 14
Location:3520840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630750 MAPKKK10 (1 of 8) IPR000719//IPR001245//IPR011009 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain; Mitogen-Activated Protein Kinase Kinase Kinase CDS
lncRNA_TCONS_00105232 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGAACGCCGAGCCGGCCCCATTCGCGAACTGGAACTGTTCGCTGCCAA
Internal bar code:TTTTTGTAGTCCCTTGCGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3110
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TGAATGCGGTTTTGCCTGTG
Suggested primer 2:TGCCGAAGACTCTTCGTCAC