Insertion junction: CLIP2.018988_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018988
Chromosome:chromosome 12
Location:3099488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501000 PPT1,TPT22,TPT20 Putative UDP-GlcA transporter; (1 of 4) PTHR11132//PTHR11132:SF97 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAAGGAGGGTGAGGTGGGCAGCGTGAGGGGTGGGAGCCGGCGGTGCG
Internal bar code:TGGTCCCAGTTACCCCCTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1714
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTCGTGGCAGCAGTTTC
Suggested primer 2:GCTTCCTTTCACCTCCCCTC