Insertion junction: CLIP2.018999_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018999
Chromosome:chromosome 17
Location:1272166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705200 (1 of 1) IPR001480//IPR003072//IPR008752 - Bulb-type lectin domain // Orphan nuclear receptor, NOR1 type // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGATGCGCATTTACCTGCGAGTAAACGGCGGTGCCGTCCATGTTCTGC
Internal bar code:TGACAGTAGGAGCGTTCCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2359
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTGTATCTGCCTGTGCT
Suggested primer 2:GCAGTGTTGGATAGCAAGCG