Insertion junction: CLIP2.019009_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019009
Chromosome:chromosome 17
Location:1729637
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708450 MMP33 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAGCTCTCGCCCTCTCGCGTTTACCGCCTCTTTGTCAGCGAGCACAA
Internal bar code:GTGTGAGTTGTCTAACAATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1238
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACATCAAGTTCGCGCAG
Suggested primer 2:CCAACATCCCAAGCTACCGT