Insertion junction: CLIP2.019009_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019009
Chromosome:chromosome 17
Location:1729638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708450 MMP33 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCAATTCGCGCCGCCGCCCACAACTTGCAACTGTCATAACTGCGGCCC
Internal bar code:GTGTGAGTTGTCTAACAATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3681
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACATCCCAAGCTACCGT
Suggested primer 2:CGTACATCAAGTTCGCGCAG