Insertion junction: CLIP2.019025_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019025
Chromosome:chromosome 17
Location:852853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702200 ANK29 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACAGGCATTCCCAGGCTGCCGGGCCAATCGTGGAGACATAGCACAGCA
Internal bar code:TCCATGGGACTACATACTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1787
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTCCCCCTCGCTCTATT
Suggested primer 2:ACACCAACACACGCGTATCT