Insertion junction: CLIP2.019031_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019031
Chromosome:chromosome 12
Location:6538601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538050 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATCGCAACTTGGCCATAAGCAACACATCTAGCATCGCGTCAATCCAG
Internal bar code:GTGTCATAAGTCATACTAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:942
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCCAACATGCACACAAT
Suggested primer 2:GCACAAGGTTTGATGGCTGG