Insertion junction: CLIP2.019037_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019037
Chromosome:chromosome 3
Location:4662736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177100 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGAGGATGGGGCGGGGAGGCAGGGGCGGGGGTCACGGGTTTGCGTG
Internal bar code:AACTCACGGATTCGATTATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1509
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTCAAACCTCGGTTGC
Suggested primer 2:CTAATGGCTGTGCGCATTCC