Insertion junction: CLIP2.019041_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019041
Chromosome:chromosome 6
Location:8463362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308700 (1 of 1) PTHR31595:SF1 - LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCTTACGGCCGCTGCTGTGCCTGGCACTGTGTGGCCACGCCCTAGGG
Internal bar code:ACGCCAAGTATTGTGCCGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3150
LEAP-Seq percent confirming:94.6429
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGGTTGAGGCCCATACAC
Suggested primer 2:GGTGGATACTGGGTAGGGGT