Insertion junction: CLIP2.019044_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019044
Chromosome:chromosome 15
Location:1620752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre19.g750547 NDA2 thylakoid NADH dehydrogenase; (1 of 3) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGAGTGTGCTGCTTGCTAGCTAGCCGGCTGCGGATGCGATCTGGCTAG
Internal bar code:ACAAACCTCTAACGAATATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:479
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCGACACATGCGTCTCC
Suggested primer 2:CACCTCCATCTCATCGCTCC