Insertion junction: CLIP2.019049_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019049
Chromosome:chromosome 17
Location:1982972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710450 HTB29,HTB44 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCAAGAAGGAGCCCTCCAAGAAGGCTGCCAAGGAGCCCAAGGGCGAT
Internal bar code:TTGCTGTAACTCTGCGTTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1835
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTCATTACCCCATCCCG
Suggested primer 2:TTGCCCTTCTTCAGGTAGCG