Insertion junction: CLIP2.019051_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019051
Chromosome:chromosome 3
Location:6270138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191800 (1 of 33) PF13855 - Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGCGCGACCGTGCATAGATGGATTGGTTACACTGCTGCGTGGGGCGC
Internal bar code:AGTTTAAGGTGGGTCTGTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3627
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAACGCGTTTGTGTGTTG
Suggested primer 2:CGCATACGCAGTCACACAAG