Insertion junction: CLIP2.019075_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019075
Chromosome:chromosome 16
Location:634615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691900 PUS19 RNA pseudouridine synthase; (1 of 1) PTHR11142:SF9 - TRNA PSEUDOURIDINE SYNTHASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGAGAAAGGGGTTCATAGGACCAAGTGATAACAGGACGCCAAGCAAA
Internal bar code:TCGATTAGGTCTGTAATCGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2915
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCCTGTCTGCCATACAC
Suggested primer 2:GCTGTTTGCTTGCACCATCA