Insertion junction: CLIP2.019076_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019076
Chromosome:chromosome 2
Location:5944604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117950 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCACACTGCCGCCACCTCCACTGCCGCAGGGCCGCCGGCGGGCGCTAA
Internal bar code:GGTTGTTAAGCAGAGTCGTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1496
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATGTCAAGGCAATCGAG
Suggested primer 2:CTCCATGGGCATCTGGGTTT